Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.44□□□□□ -0.1
Gli1P47806 Gm10576-201ENSMUST00000191927 825 ntBASIC14.44□□□□□ -0.1
Gli1P47806 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.44□□□□□ -0.1
Gli1P47806 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gli1P47806 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.44□□□□□ -0.1
Gli1P47806 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Gli1P47806 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli1P47806 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Gli1P47806 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Gli1P47806 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.43□□□□□ -0.1
Gli1P47806 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.43□□□□□ -0.1
Gli1P47806 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.43□□□□□ -0.1
Gli1P47806 Gm8655-201ENSMUST00000221159 852 ntBASIC14.43□□□□□ -0.1
Gli1P47806 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Gli1P47806 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.43□□□□□ -0.1
Gli1P47806 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Gli1P47806 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Gli1P47806 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli1P47806 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Gli1P47806 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Gli1P47806 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gli1P47806 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Gli1P47806 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.42□□□□□ -0.1
Gli1P47806 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gli1P47806 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.42□□□□□ -0.1
Gli1P47806 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.42□□□□□ -0.1
Gli1P47806 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.42□□□□□ -0.1
Gli1P47806 Gm7063-201ENSMUST00000186840 981 ntBASIC14.42□□□□□ -0.1
Gli1P47806 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gli1P47806 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gli1P47806 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Gli1P47806 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gli1P47806 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli1P47806 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.41□□□□□ -0.1
Gli1P47806 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.41□□□□□ -0.1
Gli1P47806 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gli1P47806 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Gm7222-201ENSMUST00000117512 906 ntBASIC14.41□□□□□ -0.1
Gli1P47806 Gm11780-201ENSMUST00000136880 516 ntBASIC14.41□□□□□ -0.1
Gli1P47806 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Gli1P47806 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Gm18622-201ENSMUST00000219361 595 ntBASIC14.41□□□□□ -0.1
Gli1P47806 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Gli1P47806 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Carlr-201ENSMUST00000181515 2574 ntBASIC14.41□□□□□ -0.1
Gli1P47806 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms