Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sdc2P43407 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sdc2P43407 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sdc2P43407 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sdc2P43407 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sdc2P43407 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.56■□□□□ 0.24
Sdc2P43407 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.56■□□□□ 0.24
Sdc2P43407 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.56■□□□□ 0.24
Sdc2P43407 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sdc2P43407 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sdc2P43407 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sdc2P43407 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.56■□□□□ 0.24
Sdc2P43407 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Sdc2P43407 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sdc2P43407 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sdc2P43407 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sdc2P43407 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sdc2P43407 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sdc2P43407 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.55■□□□□ 0.24
Sdc2P43407 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sdc2P43407 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.55■□□□□ 0.24
Sdc2P43407 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.55■□□□□ 0.24
Sdc2P43407 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.55■□□□□ 0.24
Sdc2P43407 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
Sdc2P43407 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Sdc2P43407 Gm10060-201ENSMUST00000212002 111 ntBASIC16.55■□□□□ 0.24
Sdc2P43407 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.55■□□□□ 0.24
Sdc2P43407 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
Sdc2P43407 AV026068-213ENSMUST00000223675 1171 ntBASIC16.55■□□□□ 0.24
Sdc2P43407 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sdc2P43407 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sdc2P43407 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.55■□□□□ 0.24
Sdc2P43407 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Sdc2P43407 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.54■□□□□ 0.24
Sdc2P43407 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.54■□□□□ 0.24
Sdc2P43407 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sdc2P43407 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.54■□□□□ 0.24
Sdc2P43407 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Sdc2P43407 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms