Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-2P42586 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-2P42586 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-2P42586 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.52□□□□□ -0.25
Nkx2-2P42586 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.52□□□□□ -0.25
Nkx2-2P42586 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Nkx2-2P42586 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.51□□□□□ -0.25
Nkx2-2P42586 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.51□□□□□ -0.25
Nkx2-2P42586 Gm15483-201ENSMUST00000120338 456 ntBASIC13.51□□□□□ -0.25
Nkx2-2P42586 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.51□□□□□ -0.25
Nkx2-2P42586 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.51□□□□□ -0.25
Nkx2-2P42586 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-2P42586 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.5□□□□□ -0.25
Nkx2-2P42586 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Gm45612-201ENSMUST00000211320 160 ntBASIC13.5□□□□□ -0.25
Nkx2-2P42586 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-2P42586 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-2P42586 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms