Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.12□□□□□ -0.15
Tnfsf9P41274 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.12□□□□□ -0.15
Tnfsf9P41274 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.12□□□□□ -0.15
Tnfsf9P41274 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tnfsf9P41274 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.12□□□□□ -0.15
Tnfsf9P41274 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.12□□□□□ -0.15
Tnfsf9P41274 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf9P41274 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Gm5779-201ENSMUST00000218467 910 ntBASIC14.11□□□□□ -0.15
Tnfsf9P41274 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf9P41274 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Tnfsf9P41274 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Tnfsf9P41274 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tnfsf9P41274 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.1□□□□□ -0.15
Tnfsf9P41274 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.1□□□□□ -0.15
Tnfsf9P41274 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf9P41274 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf9P41274 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms