Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox6P40645 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Gm7222-201ENSMUST00000117512 906 ntBASIC13.88□□□□□ -0.19
Sox6P40645 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.88□□□□□ -0.19
Sox6P40645 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox6P40645 Gm7230-201ENSMUST00000173026 815 ntBASIC13.88□□□□□ -0.19
Sox6P40645 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Gm7461-201ENSMUST00000058918 827 ntBASIC13.88□□□□□ -0.19
Sox6P40645 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox6P40645 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox6P40645 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox6P40645 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox6P40645 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sox6P40645 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox6P40645 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sox6P40645 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sox6P40645 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox6P40645 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.87□□□□□ -0.19
Sox6P40645 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Gm15173-201ENSMUST00000122049 433 ntBASIC13.87□□□□□ -0.19
Sox6P40645 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Gm27646-201ENSMUST00000183989 110 ntBASIC13.87□□□□□ -0.19
Sox6P40645 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.87□□□□□ -0.19
Sox6P40645 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Sox6P40645 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.87□□□□□ -0.19
Sox6P40645 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sox6P40645 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.87□□□□□ -0.19
Sox6P40645 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.87□□□□□ -0.19
Sox6P40645 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Sox6P40645 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.87□□□□□ -0.19
Sox6P40645 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox6P40645 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sox6P40645 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sox6P40645 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.86□□□□□ -0.19
Sox6P40645 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Sox6P40645 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.86□□□□□ -0.19
Sox6P40645 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.86□□□□□ -0.19
Sox6P40645 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sox6P40645 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Sox6P40645 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Sox6P40645 Gm10060-201ENSMUST00000212002 111 ntBASIC13.86□□□□□ -0.19
Sox6P40645 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.86□□□□□ -0.19
Sox6P40645 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.86□□□□□ -0.19
Sox6P40645 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.86□□□□□ -0.19
Sox6P40645 Mzt1-203ENSMUST00000227948 952 ntBASIC13.86□□□□□ -0.19
Sox6P40645 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox6P40645 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms