Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TfamP40630 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
TfamP40630 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TfamP40630 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TfamP40630 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.3□□□□□ -0.12
TfamP40630 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.3□□□□□ -0.12
TfamP40630 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.3□□□□□ -0.12
TfamP40630 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TfamP40630 Gm18246-201ENSMUST00000221023 728 ntBASIC14.3□□□□□ -0.12
TfamP40630 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.3□□□□□ -0.12
TfamP40630 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.3□□□□□ -0.12
TfamP40630 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TfamP40630 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TfamP40630 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
TfamP40630 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TfamP40630 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TfamP40630 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TfamP40630 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
TfamP40630 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Gm7153-201ENSMUST00000117092 455 ntBASIC14.29□□□□□ -0.12
TfamP40630 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.29□□□□□ -0.12
TfamP40630 Gm4899-201ENSMUST00000178708 719 ntBASIC14.29□□□□□ -0.12
TfamP40630 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
TfamP40630 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.29□□□□□ -0.12
TfamP40630 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.29□□□□□ -0.12
TfamP40630 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.29□□□□□ -0.12
TfamP40630 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TfamP40630 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TfamP40630 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TfamP40630 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TfamP40630 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TfamP40630 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TfamP40630 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.28□□□□□ -0.12
TfamP40630 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.28□□□□□ -0.12
TfamP40630 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.28□□□□□ -0.12
TfamP40630 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
TfamP40630 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.28□□□□□ -0.12
TfamP40630 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
TfamP40630 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
TfamP40630 AV026068-213ENSMUST00000223675 1171 ntBASIC14.28□□□□□ -0.12
TfamP40630 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TfamP40630 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TfamP40630 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TfamP40630 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TfamP40630 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TfamP40630 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms