Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Cxcl12P40224 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.1■□□□□ 0.01
Cxcl12P40224 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Gm13226-201ENSMUST00000117838 404 ntBASIC15.1■□□□□ 0.01
Cxcl12P40224 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cxcl12P40224 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cxcl12P40224 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.1■□□□□ 0.01
Cxcl12P40224 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cxcl12P40224 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.1■□□□□ 0.01
Cxcl12P40224 Olfr582-201ENSMUST00000098212 960 ntBASIC15.1■□□□□ 0.01
Cxcl12P40224 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcl12P40224 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cxcl12P40224 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.09■□□□□ 0.01
Cxcl12P40224 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.09■□□□□ 0.01
Cxcl12P40224 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.09■□□□□ 0.01
Cxcl12P40224 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cxcl12P40224 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Cxcl12P40224 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.09■□□□□ 0.01
Cxcl12P40224 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Cxcl12P40224 Gm27486-201ENSMUST00000184923 80 ntBASIC15.09■□□□□ 0.01
Cxcl12P40224 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.09■□□□□ 0.01
Cxcl12P40224 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.09■□□□□ 0.01
Cxcl12P40224 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.09■□□□□ 0.01
Cxcl12P40224 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.09■□□□□ 0.01
Cxcl12P40224 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cxcl12P40224 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.09■□□□□ 0.01
Cxcl12P40224 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcl12P40224 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cxcl12P40224 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Cxcl12P40224 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cxcl12P40224 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Cxcl12P40224 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cxcl12P40224 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cxcl12P40224 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.08■□□□□ 0
Cxcl12P40224 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cxcl12P40224 Snora78-201ENSMUST00000158630 128 ntBASIC15.08■□□□□ 0
Cxcl12P40224 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Cxcl12P40224 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Cxcl12P40224 Gm45784-201ENSMUST00000188360 142 ntBASIC15.08■□□□□ 0
Cxcl12P40224 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.08■□□□□ 0
Cxcl12P40224 Gm5279-201ENSMUST00000199575 745 ntBASIC15.08■□□□□ 0
Cxcl12P40224 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cxcl12P40224 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.08■□□□□ 0
Cxcl12P40224 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cxcl12P40224 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cxcl12P40224 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Cxcl12P40224 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Cxcl12P40224 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cxcl12P40224 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cxcl12P40224 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cxcl12P40224 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cxcl12P40224 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cxcl12P40224 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cxcl12P40224 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cxcl12P40224 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.07■□□□□ 0
Cxcl12P40224 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cxcl12P40224 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms