Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Foxa1P35582 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Foxa1P35582 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Foxa1P35582 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Foxa1P35582 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.65□□□□□ -0.22
Foxa1P35582 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.65□□□□□ -0.22
Foxa1P35582 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.65□□□□□ -0.22
Foxa1P35582 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.65□□□□□ -0.22
Foxa1P35582 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.65□□□□□ -0.22
Foxa1P35582 Gm20553-201ENSMUST00000204205 844 ntBASIC13.65□□□□□ -0.22
Foxa1P35582 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.65□□□□□ -0.22
Foxa1P35582 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Foxa1P35582 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Foxa1P35582 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.65□□□□□ -0.22
Foxa1P35582 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.65□□□□□ -0.22
Foxa1P35582 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Foxa1P35582 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Foxa1P35582 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.23
Foxa1P35582 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Foxa1P35582 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.64□□□□□ -0.23
Foxa1P35582 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Foxa1P35582 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.64□□□□□ -0.23
Foxa1P35582 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.64□□□□□ -0.23
Foxa1P35582 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Foxa1P35582 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.64□□□□□ -0.23
Foxa1P35582 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.64□□□□□ -0.23
Foxa1P35582 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.64□□□□□ -0.23
Foxa1P35582 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.64□□□□□ -0.23
Foxa1P35582 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.64□□□□□ -0.23
Foxa1P35582 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Foxa1P35582 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Foxa1P35582 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Foxa1P35582 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Foxa1P35582 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.64□□□□□ -0.23
Foxa1P35582 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.64□□□□□ -0.23
Foxa1P35582 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Foxa1P35582 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.64□□□□□ -0.23
Foxa1P35582 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Foxa1P35582 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.63□□□□□ -0.23
Foxa1P35582 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.63□□□□□ -0.23
Foxa1P35582 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.63□□□□□ -0.23
Foxa1P35582 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Gm13464-201ENSMUST00000119418 935 ntBASIC13.63□□□□□ -0.23
Foxa1P35582 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.63□□□□□ -0.23
Foxa1P35582 Gm11025-201ENSMUST00000140773 466 ntBASIC13.63□□□□□ -0.23
Foxa1P35582 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.63□□□□□ -0.23
Foxa1P35582 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Foxa1P35582 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.63□□□□□ -0.23
Foxa1P35582 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms