Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RetP35546 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RetP35546 Mir7023-201ENSMUST00000185093 64 ntBASIC13.83□□□□□ -0.2
RetP35546 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.83□□□□□ -0.2
RetP35546 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RetP35546 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.83□□□□□ -0.2
RetP35546 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RetP35546 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.83□□□□□ -0.2
RetP35546 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RetP35546 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.82□□□□□ -0.2
RetP35546 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.82□□□□□ -0.2
RetP35546 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.82□□□□□ -0.2
RetP35546 Gm13597-201ENSMUST00000121239 375 ntBASIC13.82□□□□□ -0.2
RetP35546 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.82□□□□□ -0.2
RetP35546 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.82□□□□□ -0.2
RetP35546 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.82□□□□□ -0.2
RetP35546 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.82□□□□□ -0.2
RetP35546 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
RetP35546 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.82□□□□□ -0.2
RetP35546 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RetP35546 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RetP35546 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
RetP35546 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RetP35546 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.82□□□□□ -0.2
RetP35546 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
RetP35546 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RetP35546 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
RetP35546 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RetP35546 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.81□□□□□ -0.2
RetP35546 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.81□□□□□ -0.2
RetP35546 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RetP35546 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RetP35546 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RetP35546 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.81□□□□□ -0.2
RetP35546 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RetP35546 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RetP35546 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RetP35546 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms