Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.31□□□□□ -0.12
Hoxc11P31313 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.31□□□□□ -0.12
Hoxc11P31313 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.31□□□□□ -0.12
Hoxc11P31313 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hoxc11P31313 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc11P31313 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc11P31313 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.31□□□□□ -0.12
Hoxc11P31313 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hoxc11P31313 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc11P31313 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc11P31313 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc11P31313 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxc11P31313 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hoxc11P31313 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm22065-201ENSMUST00000103753 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm22066-201ENSMUST00000103761 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm24932-201ENSMUST00000103763 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm24115-201ENSMUST00000103799 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm22190-201ENSMUST00000103827 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm22191-201ENSMUST00000103831 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm24721-201ENSMUST00000103849 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm28018-201ENSMUST00000103869 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm26399-201ENSMUST00000103937 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm25349-201ENSMUST00000177728 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm23616-201ENSMUST00000177797 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm25871-201ENSMUST00000177816 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm24752-201ENSMUST00000178240 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm24496-201ENSMUST00000178287 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm25649-201ENSMUST00000178476 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm25548-201ENSMUST00000178681 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm23147-201ENSMUST00000178841 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm26095-201ENSMUST00000179270 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm22171-201ENSMUST00000179283 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm23936-201ENSMUST00000179354 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm22619-201ENSMUST00000179516 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm25255-201ENSMUST00000179579 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm24755-201ENSMUST00000179691 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm26506-201ENSMUST00000179692 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm25086-201ENSMUST00000179931 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm23243-201ENSMUST00000180047 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm24659-201ENSMUST00000180212 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm24169-201ENSMUST00000180244 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm23689-201ENSMUST00000180354 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm27359-201ENSMUST00000184153 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm27785-201ENSMUST00000184268 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm27466-201ENSMUST00000184396 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm27703-201ENSMUST00000184836 110 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hoxc11P31313 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.3□□□□□ -0.12
Hoxc11P31313 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxc11P31313 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.29□□□□□ -0.12
Hoxc11P31313 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxc11P31313 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxc11P31313 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 AA543401-201ENSMUST00000164248 1269 ntBASIC14.29□□□□□ -0.12
Hoxc11P31313 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.29□□□□□ -0.12
Hoxc11P31313 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxc11P31313 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.29□□□□□ -0.12
Hoxc11P31313 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.29□□□□□ -0.12
Hoxc11P31313 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc11P31313 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms