Protein–RNA interactions for Protein: P28310

Defa3, Alpha-defensin 3, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defa3P28310 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.57□□□□□ -0.72
Defa3P28310 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
Defa3P28310 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Defa3P28310 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC10.57□□□□□ -0.72
Defa3P28310 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Defa3P28310 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.57□□□□□ -0.72
Defa3P28310 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC10.57□□□□□ -0.72
Defa3P28310 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.57□□□□□ -0.72
Defa3P28310 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Defa3P28310 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Rubie-203ENSMUST00000227803 2430 ntBASIC10.57□□□□□ -0.72
Defa3P28310 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC10.57□□□□□ -0.72
Defa3P28310 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Defa3P28310 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Defa3P28310 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Defa3P28310 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Defa3P28310 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Defa3P28310 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Defa3P28310 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.56□□□□□ -0.72
Defa3P28310 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Defa3P28310 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.56□□□□□ -0.72
Defa3P28310 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.56□□□□□ -0.72
Defa3P28310 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC10.56□□□□□ -0.72
Defa3P28310 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC10.56□□□□□ -0.72
Defa3P28310 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.56□□□□□ -0.72
Defa3P28310 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC10.56□□□□□ -0.72
Defa3P28310 Gm2274-201ENSMUST00000184539 609 ntBASIC10.56□□□□□ -0.72
Defa3P28310 Gm43799-201ENSMUST00000201845 579 ntBASIC10.56□□□□□ -0.72
Defa3P28310 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Defa3P28310 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Defa3P28310 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.56□□□□□ -0.72
Defa3P28310 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.56□□□□□ -0.72
Defa3P28310 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Defa3P28310 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.56□□□□□ -0.72
Defa3P28310 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.56□□□□□ -0.72
Defa3P28310 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Defa3P28310 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.55□□□□□ -0.72
Defa3P28310 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Defa3P28310 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC10.55□□□□□ -0.72
Defa3P28310 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Defa3P28310 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Defa3P28310 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Defa3P28310 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms