Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ccl6P27784 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ccl6P27784 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.52□□□□□ -0.57
Ccl6P27784 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl6P27784 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.51□□□□□ -0.57
Ccl6P27784 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.51□□□□□ -0.57
Ccl6P27784 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccl6P27784 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Ccl6P27784 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccl6P27784 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Ccl6P27784 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.51□□□□□ -0.57
Ccl6P27784 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccl6P27784 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.51□□□□□ -0.57
Ccl6P27784 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.51□□□□□ -0.57
Ccl6P27784 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccl6P27784 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccl6P27784 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccl6P27784 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.51□□□□□ -0.57
Ccl6P27784 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccl6P27784 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl6P27784 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.5□□□□□ -0.57
Ccl6P27784 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccl6P27784 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.5□□□□□ -0.57
Ccl6P27784 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.5□□□□□ -0.57
Ccl6P27784 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.5□□□□□ -0.57
Ccl6P27784 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.5□□□□□ -0.57
Ccl6P27784 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.5□□□□□ -0.57
Ccl6P27784 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.5□□□□□ -0.57
Ccl6P27784 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccl6P27784 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ccl6P27784 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ccl6P27784 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.5□□□□□ -0.57
Ccl6P27784 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Carlr-201ENSMUST00000181515 2574 ntBASIC11.5□□□□□ -0.57
Ccl6P27784 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.5□□□□□ -0.57
Ccl6P27784 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms