Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cd40lgP27548 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Cd40lgP27548 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.63□□□□□ -0.23
Cd40lgP27548 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.63□□□□□ -0.23
Cd40lgP27548 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Gm14494-201ENSMUST00000118786 435 ntBASIC13.63□□□□□ -0.23
Cd40lgP27548 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.63□□□□□ -0.23
Cd40lgP27548 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.63□□□□□ -0.23
Cd40lgP27548 Gm37935-201ENSMUST00000192012 982 ntBASIC13.63□□□□□ -0.23
Cd40lgP27548 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.63□□□□□ -0.23
Cd40lgP27548 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.63□□□□□ -0.23
Cd40lgP27548 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cd40lgP27548 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.63□□□□□ -0.23
Cd40lgP27548 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd40lgP27548 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cd40lgP27548 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cd40lgP27548 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cd40lgP27548 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd40lgP27548 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd40lgP27548 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cd40lgP27548 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.62□□□□□ -0.23
Cd40lgP27548 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cd40lgP27548 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cd40lgP27548 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd40lgP27548 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd40lgP27548 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.62□□□□□ -0.23
Cd40lgP27548 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.62□□□□□ -0.23
Cd40lgP27548 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.62□□□□□ -0.23
Cd40lgP27548 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cd40lgP27548 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Cd40lgP27548 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd40lgP27548 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd40lgP27548 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.62□□□□□ -0.23
Cd40lgP27548 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd40lgP27548 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cd40lgP27548 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd40lgP27548 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cd40lgP27548 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd40lgP27548 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cd40lgP27548 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.61□□□□□ -0.23
Cd40lgP27548 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.61□□□□□ -0.23
Cd40lgP27548 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.61□□□□□ -0.23
Cd40lgP27548 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Cd40lgP27548 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cd40lgP27548 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.61□□□□□ -0.23
Cd40lgP27548 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cd40lgP27548 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.61□□□□□ -0.23
Cd40lgP27548 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.61□□□□□ -0.23
Cd40lgP27548 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.61□□□□□ -0.23
Cd40lgP27548 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd40lgP27548 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd40lgP27548 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.6□□□□□ -0.23
Cd40lgP27548 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms