Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hmga1P17095 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hmga1P17095 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga1P17095 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga1P17095 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Hmga1P17095 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.03■□□□□ -0
Hmga1P17095 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.03■□□□□ -0
Hmga1P17095 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.03■□□□□ -0
Hmga1P17095 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.03■□□□□ -0
Hmga1P17095 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Mir1897-201ENSMUST00000122581 272 ntBASIC15.03■□□□□ -0
Hmga1P17095 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Hmga1P17095 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.03■□□□□ -0
Hmga1P17095 Dupd1-202ENSMUST00000224735 548 ntBASIC15.03■□□□□ -0
Hmga1P17095 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.03■□□□□ -0
Hmga1P17095 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Efs-202ENSMUST00000227037 2540 ntBASIC15.03■□□□□ -0
Hmga1P17095 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga1P17095 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.02■□□□□ -0
Hmga1P17095 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Hmga1P17095 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Hmga1P17095 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.02■□□□□ -0
Hmga1P17095 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Hmga1P17095 Gm15487-201ENSMUST00000122373 465 ntBASIC15.02■□□□□ -0
Hmga1P17095 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Hmga1P17095 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga1P17095 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga1P17095 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga1P17095 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga1P17095 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga1P17095 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga1P17095 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga1P17095 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga1P17095 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Hmga1P17095 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga1P17095 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Hmga1P17095 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga1P17095 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.02□□□□□ -0.01
Hmga1P17095 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga1P17095 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Hmga1P17095 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga1P17095 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Hmga1P17095 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.01□□□□□ -0.01
Hmga1P17095 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga1P17095 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga1P17095 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga1P17095 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.01□□□□□ -0.01
Hmga1P17095 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Hmga1P17095 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.01□□□□□ -0.01
Hmga1P17095 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.01□□□□□ -0.01
Hmga1P17095 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga1P17095 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga1P17095 Gm27437-201ENSMUST00000183429 107 ntBASIC15.01□□□□□ -0.01
Hmga1P17095 Mir6977-201ENSMUST00000184960 64 ntBASIC15.01□□□□□ -0.01
Hmga1P17095 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.01□□□□□ -0.01
Hmga1P17095 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.01□□□□□ -0.01
Hmga1P17095 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.01□□□□□ -0.01
Hmga1P17095 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga1P17095 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms