Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rb1P13405 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.13■□□□□ 0.01
Rb1P13405 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.13■□□□□ 0.01
Rb1P13405 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rb1P13405 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.13■□□□□ 0.01
Rb1P13405 Gm5186-201ENSMUST00000218781 920 ntBASIC15.13■□□□□ 0.01
Rb1P13405 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rb1P13405 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Rb1P13405 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.13■□□□□ 0.01
Rb1P13405 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.13■□□□□ 0.01
Rb1P13405 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rb1P13405 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rb1P13405 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rb1P13405 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.12■□□□□ 0.01
Rb1P13405 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.12■□□□□ 0.01
Rb1P13405 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Mir6990-201ENSMUST00000183724 91 ntBASIC15.12■□□□□ 0.01
Rb1P13405 Mir7023-201ENSMUST00000185093 64 ntBASIC15.12■□□□□ 0.01
Rb1P13405 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.12■□□□□ 0.01
Rb1P13405 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rb1P13405 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rb1P13405 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Rb1P13405 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.12■□□□□ 0.01
Rb1P13405 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Rb1P13405 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.12■□□□□ 0.01
Rb1P13405 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rb1P13405 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rb1P13405 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rb1P13405 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.11■□□□□ 0.01
Rb1P13405 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rb1P13405 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rb1P13405 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rb1P13405 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rb1P13405 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.11■□□□□ 0.01
Rb1P13405 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.11■□□□□ 0.01
Rb1P13405 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.11■□□□□ 0.01
Rb1P13405 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rb1P13405 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.11■□□□□ 0.01
Rb1P13405 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rb1P13405 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rb1P13405 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms