Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.47□□□□□ -0.57
Ccl1P10146 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccl1P10146 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl1P10146 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccl1P10146 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.47□□□□□ -0.57
Ccl1P10146 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ccl1P10146 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 Matn2-206ENSMUST00000228570 2798 ntBASIC11.46□□□□□ -0.57
Ccl1P10146 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ccl1P10146 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.46□□□□□ -0.57
Ccl1P10146 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ccl1P10146 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 Gm11355-201ENSMUST00000121120 306 ntBASIC11.46□□□□□ -0.57
Ccl1P10146 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Ccl1P10146 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.46□□□□□ -0.57
Ccl1P10146 Gm19164-201ENSMUST00000210667 640 ntBASIC11.46□□□□□ -0.57
Ccl1P10146 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl1P10146 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ccl1P10146 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl1P10146 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl1P10146 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Ccl1P10146 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl1P10146 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl1P10146 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl1P10146 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl1P10146 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl1P10146 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl1P10146 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl1P10146 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl1P10146 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl1P10146 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.46□□□□□ -0.58
Ccl1P10146 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.46□□□□□ -0.58
Ccl1P10146 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Ccl1P10146 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl1P10146 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl1P10146 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccl1P10146 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.45□□□□□ -0.58
Ccl1P10146 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccl1P10146 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.45□□□□□ -0.58
Ccl1P10146 Gm13436-201ENSMUST00000120418 567 ntBASIC11.45□□□□□ -0.58
Ccl1P10146 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.45□□□□□ -0.58
Ccl1P10146 Gm27011-201ENSMUST00000182352 972 ntBASIC11.45□□□□□ -0.58
Ccl1P10146 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.45□□□□□ -0.58
Ccl1P10146 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Ccl1P10146 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccl1P10146 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl1P10146 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccl1P10146 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Ccl1P10146 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl1P10146 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl1P10146 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl1P10146 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl1P10146 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl1P10146 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl1P10146 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl1P10146 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl1P10146 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl1P10146 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl1P10146 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Ccl1P10146 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl1P10146 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms