Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Smim1P0C8K7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smim1P0C8K7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smim1P0C8K7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.16□□□□□ -0.78
Smim1P0C8K7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Smim1P0C8K7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.16□□□□□ -0.78
Smim1P0C8K7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Smim1P0C8K7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Gm18666-201ENSMUST00000190039 958 ntBASIC10.16□□□□□ -0.78
Smim1P0C8K7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.16□□□□□ -0.78
Smim1P0C8K7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.16□□□□□ -0.78
Smim1P0C8K7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Smim1P0C8K7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.16□□□□□ -0.78
Smim1P0C8K7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Smim1P0C8K7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smim1P0C8K7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.15□□□□□ -0.78
Smim1P0C8K7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.15□□□□□ -0.78
Smim1P0C8K7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.15□□□□□ -0.78
Smim1P0C8K7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC10.15□□□□□ -0.78
Smim1P0C8K7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smim1P0C8K7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms