Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ctla4P09793 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ctla4P09793 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Ctla4P09793 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.72□□□□□ -0.21
Ctla4P09793 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.72□□□□□ -0.21
Ctla4P09793 Gm18057-201ENSMUST00000208220 503 ntBASIC13.72□□□□□ -0.21
Ctla4P09793 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ctla4P09793 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ctla4P09793 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Ctla4P09793 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Ctla4P09793 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ctla4P09793 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ctla4P09793 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctla4P09793 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Ctla4P09793 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctla4P09793 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ctla4P09793 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.71□□□□□ -0.21
Ctla4P09793 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ctla4P09793 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.71□□□□□ -0.21
Ctla4P09793 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.71□□□□□ -0.21
Ctla4P09793 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ctla4P09793 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.71□□□□□ -0.21
Ctla4P09793 Mir6990-201ENSMUST00000183724 91 ntBASIC13.71□□□□□ -0.21
Ctla4P09793 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.71□□□□□ -0.21
Ctla4P09793 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.71□□□□□ -0.21
Ctla4P09793 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.71□□□□□ -0.21
Ctla4P09793 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.71□□□□□ -0.21
Ctla4P09793 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctla4P09793 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ctla4P09793 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ctla4P09793 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ctla4P09793 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ctla4P09793 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Ctla4P09793 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ctla4P09793 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.71□□□□□ -0.22
Ctla4P09793 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ctla4P09793 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ctla4P09793 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Ctla4P09793 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ctla4P09793 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ctla4P09793 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ctla4P09793 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.71□□□□□ -0.22
Ctla4P09793 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ctla4P09793 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Ctla4P09793 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ctla4P09793 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.7□□□□□ -0.22
Ctla4P09793 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.7□□□□□ -0.22
Ctla4P09793 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.7□□□□□ -0.22
Ctla4P09793 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ctla4P09793 Gm43125-201ENSMUST00000201724 730 ntBASIC13.7□□□□□ -0.22
Ctla4P09793 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.7□□□□□ -0.22
Ctla4P09793 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.7□□□□□ -0.22
Ctla4P09793 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Ctla4P09793 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.7□□□□□ -0.22
Ctla4P09793 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.7□□□□□ -0.22
Ctla4P09793 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.7□□□□□ -0.22
Ctla4P09793 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctla4P09793 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms