Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
NclP09405 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NclP09405 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NclP09405 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NclP09405 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC21.87■■□□□ 1.09
NclP09405 Gm18766-201ENSMUST00000189811 808 ntBASIC21.87■■□□□ 1.09
NclP09405 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC21.87■■□□□ 1.09
NclP09405 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NclP09405 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NclP09405 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC21.86■■□□□ 1.09
NclP09405 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NclP09405 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NclP09405 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
NclP09405 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NclP09405 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC21.86■■□□□ 1.09
NclP09405 Gm13223-201ENSMUST00000118609 747 ntBASIC21.86■■□□□ 1.09
NclP09405 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC21.86■■□□□ 1.09
NclP09405 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
NclP09405 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
NclP09405 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC21.86■■□□□ 1.09
NclP09405 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
NclP09405 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
NclP09405 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NclP09405 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
NclP09405 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NclP09405 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NclP09405 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
NclP09405 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NclP09405 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
NclP09405 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
NclP09405 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Gm43195-201ENSMUST00000200614 2332 ntBASIC21.85■■□□□ 1.09
NclP09405 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
NclP09405 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
NclP09405 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
NclP09405 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC21.85■■□□□ 1.09
NclP09405 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Gm17837-201ENSMUST00000186435 985 ntBASIC21.85■■□□□ 1.09
NclP09405 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC21.85■■□□□ 1.09
NclP09405 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NclP09405 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
NclP09405 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
NclP09405 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NclP09405 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NclP09405 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
NclP09405 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
NclP09405 Gm13464-201ENSMUST00000119418 935 ntBASIC21.84■■□□□ 1.09
NclP09405 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC21.84■■□□□ 1.09
NclP09405 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NclP09405 Gm25144-201ENSMUST00000179561 110 ntBASIC21.84■■□□□ 1.09
NclP09405 Gm25352-201ENSMUST00000179815 110 ntBASIC21.84■■□□□ 1.09
NclP09405 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NclP09405 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NclP09405 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NclP09405 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NclP09405 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
NclP09405 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
NclP09405 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC21.83■■□□□ 1.09
NclP09405 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Gm28630-201ENSMUST00000187806 498 ntBASIC21.83■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms