Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.88■□□□□ 0.45
Col4a1P02463 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Col4a1P02463 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.88■□□□□ 0.45
Col4a1P02463 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.88■□□□□ 0.45
Col4a1P02463 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.88■□□□□ 0.45
Col4a1P02463 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Col4a1P02463 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.88■□□□□ 0.45
Col4a1P02463 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.88■□□□□ 0.45
Col4a1P02463 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col4a1P02463 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Gm11478-201ENSMUST00000117851 599 ntBASIC17.87■□□□□ 0.45
Col4a1P02463 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.87■□□□□ 0.45
Col4a1P02463 Gm5279-201ENSMUST00000199575 745 ntBASIC17.87■□□□□ 0.45
Col4a1P02463 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.87■□□□□ 0.45
Col4a1P02463 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.87■□□□□ 0.45
Col4a1P02463 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Col4a1P02463 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Col4a1P02463 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.87■□□□□ 0.45
Col4a1P02463 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.87■□□□□ 0.45
Col4a1P02463 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Col4a1P02463 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Col4a1P02463 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.87■□□□□ 0.45
Col4a1P02463 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
Col4a1P02463 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Col4a1P02463 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Col4a1P02463 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.87■□□□□ 0.45
Col4a1P02463 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col4a1P02463 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a1P02463 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a1P02463 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a1P02463 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.86■□□□□ 0.45
Col4a1P02463 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.86■□□□□ 0.45
Col4a1P02463 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a1P02463 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.86■□□□□ 0.45
Col4a1P02463 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Col4a1P02463 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a1P02463 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a1P02463 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a1P02463 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.86■□□□□ 0.45
Col4a1P02463 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.86■□□□□ 0.45
Col4a1P02463 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Col4a1P02463 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Col4a1P02463 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Col4a1P02463 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.86■□□□□ 0.45
Col4a1P02463 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Col4a1P02463 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col4a1P02463 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.85■□□□□ 0.45
Col4a1P02463 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col4a1P02463 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.85■□□□□ 0.45
Col4a1P02463 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Col4a1P02463 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.85■□□□□ 0.45
Col4a1P02463 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Col4a1P02463 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Col4a1P02463 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col4a1P02463 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a1P02463 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms