Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.81□□□□□ -0.68
TcraP01849 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
TcraP01849 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TcraP01849 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TcraP01849 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TcraP01849 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
TcraP01849 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
TcraP01849 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
TcraP01849 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
TcraP01849 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
TcraP01849 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TcraP01849 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.8□□□□□ -0.68
TcraP01849 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
TcraP01849 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.8□□□□□ -0.68
TcraP01849 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
TcraP01849 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.8□□□□□ -0.68
TcraP01849 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC10.8□□□□□ -0.68
TcraP01849 Gm23547-201ENSMUST00000158210 271 ntBASIC10.8□□□□□ -0.68
TcraP01849 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
TcraP01849 Gm10052-201ENSMUST00000168019 960 ntBASIC10.8□□□□□ -0.68
TcraP01849 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
TcraP01849 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Gm7729-201ENSMUST00000050143 801 ntBASIC10.8□□□□□ -0.68
TcraP01849 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.8□□□□□ -0.68
TcraP01849 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
TcraP01849 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.8□□□□□ -0.68
TcraP01849 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
TcraP01849 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TcraP01849 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.79□□□□□ -0.68
TcraP01849 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Carlr-201ENSMUST00000181515 2574 ntBASIC10.79□□□□□ -0.68
TcraP01849 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
TcraP01849 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
TcraP01849 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
TcraP01849 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
TcraP01849 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.79□□□□□ -0.68
TcraP01849 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC10.79□□□□□ -0.68
TcraP01849 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
TcraP01849 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.79□□□□□ -0.68
TcraP01849 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
TcraP01849 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
TcraP01849 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TcraP01849 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms