Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01788 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.69□□□□□ -0.54
P01788 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01788 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.69□□□□□ -0.54
P01788 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.69□□□□□ -0.54
P01788 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P01788 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.68□□□□□ -0.54
P01788 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P01788 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.68□□□□□ -0.54
P01788 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.68□□□□□ -0.54
P01788 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.68□□□□□ -0.54
P01788 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.68□□□□□ -0.54
P01788 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.68□□□□□ -0.54
P01788 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Gm33142-201ENSMUST00000193913 867 ntBASIC11.68□□□□□ -0.54
P01788 Gm43767-201ENSMUST00000198933 381 ntBASIC11.68□□□□□ -0.54
P01788 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.68□□□□□ -0.54
P01788 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.68□□□□□ -0.54
P01788 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
P01788 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
P01788 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
P01788 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P01788 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.68□□□□□ -0.54
P01788 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P01788 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.68□□□□□ -0.54
P01788 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01788 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
P01788 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.67□□□□□ -0.54
P01788 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.67□□□□□ -0.54
P01788 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
P01788 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.67□□□□□ -0.54
P01788 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.67□□□□□ -0.54
P01788 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.67□□□□□ -0.54
P01788 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
P01788 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
P01788 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.67□□□□□ -0.54
P01788 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.67□□□□□ -0.54
P01788 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.67□□□□□ -0.54
P01788 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.67□□□□□ -0.54
P01788 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.67□□□□□ -0.54
P01788 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
P01788 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.67□□□□□ -0.54
P01788 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01788 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.67□□□□□ -0.54
P01788 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01788 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
P01788 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01788 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01788 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01788 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01788 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01788 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01788 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01788 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms