Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.92■□□□□ 0.14
Vti1aO89116 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Vti1aO89116 Gm6973-201ENSMUST00000117080 721 ntBASIC15.91■□□□□ 0.14
Vti1aO89116 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.91■□□□□ 0.14
Vti1aO89116 Gm5186-201ENSMUST00000218781 920 ntBASIC15.91■□□□□ 0.14
Vti1aO89116 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.91■□□□□ 0.14
Vti1aO89116 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.91■□□□□ 0.14
Vti1aO89116 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Vti1aO89116 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vti1aO89116 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vti1aO89116 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vti1aO89116 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.91■□□□□ 0.14
Vti1aO89116 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Vti1aO89116 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.9■□□□□ 0.14
Vti1aO89116 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Vti1aO89116 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vti1aO89116 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.9■□□□□ 0.14
Vti1aO89116 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.9■□□□□ 0.14
Vti1aO89116 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vti1aO89116 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.9■□□□□ 0.14
Vti1aO89116 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.9■□□□□ 0.14
Vti1aO89116 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vti1aO89116 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vti1aO89116 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vti1aO89116 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vti1aO89116 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vti1aO89116 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.89■□□□□ 0.13
Vti1aO89116 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Vti1aO89116 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.89■□□□□ 0.13
Vti1aO89116 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Vti1aO89116 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.89■□□□□ 0.13
Vti1aO89116 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.89■□□□□ 0.13
Vti1aO89116 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Vti1aO89116 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.89■□□□□ 0.13
Vti1aO89116 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.89■□□□□ 0.13
Vti1aO89116 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.89■□□□□ 0.13
Vti1aO89116 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Vti1aO89116 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vti1aO89116 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vti1aO89116 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms