Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn3O88705 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.15□□□□□ -0.14
Hcn3O88705 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.14□□□□□ -0.15
Hcn3O88705 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.14□□□□□ -0.15
Hcn3O88705 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.14□□□□□ -0.15
Hcn3O88705 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.14□□□□□ -0.15
Hcn3O88705 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.14□□□□□ -0.15
Hcn3O88705 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.14□□□□□ -0.15
Hcn3O88705 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hcn3O88705 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Hcn3O88705 Gm27867-201ENSMUST00000184778 125 ntBASIC14.14□□□□□ -0.15
Hcn3O88705 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.14□□□□□ -0.15
Hcn3O88705 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Hcn3O88705 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.14□□□□□ -0.15
Hcn3O88705 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn3O88705 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.13□□□□□ -0.15
Hcn3O88705 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hcn3O88705 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hcn3O88705 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hcn3O88705 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.13□□□□□ -0.15
Hcn3O88705 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.13□□□□□ -0.15
Hcn3O88705 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.13□□□□□ -0.15
Hcn3O88705 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn3O88705 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.12□□□□□ -0.15
Hcn3O88705 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.12□□□□□ -0.15
Hcn3O88705 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.12□□□□□ -0.15
Hcn3O88705 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.12□□□□□ -0.15
Hcn3O88705 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.12□□□□□ -0.15
Hcn3O88705 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hcn3O88705 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.12□□□□□ -0.15
Hcn3O88705 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hcn3O88705 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hcn3O88705 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hcn3O88705 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms