Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hcn1O88704 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hcn1O88704 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hcn1O88704 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Hcn1O88704 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.16□□□□□ -0.14
Hcn1O88704 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.16□□□□□ -0.14
Hcn1O88704 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hcn1O88704 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hcn1O88704 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Hcn1O88704 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hcn1O88704 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.15□□□□□ -0.14
Hcn1O88704 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hcn1O88704 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Gm8318-201ENSMUST00000182954 872 ntBASIC14.15□□□□□ -0.14
Hcn1O88704 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.15□□□□□ -0.14
Hcn1O88704 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.15□□□□□ -0.14
Hcn1O88704 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hcn1O88704 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.15□□□□□ -0.14
Hcn1O88704 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hcn1O88704 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcn1O88704 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Hcn1O88704 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hcn1O88704 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.14□□□□□ -0.15
Hcn1O88704 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hcn1O88704 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hcn1O88704 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Gm11779-201ENSMUST00000118541 368 ntBASIC14.14□□□□□ -0.15
Hcn1O88704 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.14□□□□□ -0.15
Hcn1O88704 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.14□□□□□ -0.15
Hcn1O88704 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.14□□□□□ -0.15
Hcn1O88704 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.14□□□□□ -0.15
Hcn1O88704 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Gm9727-201ENSMUST00000161387 555 ntBASIC14.14□□□□□ -0.15
Hcn1O88704 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.14□□□□□ -0.15
Hcn1O88704 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.14□□□□□ -0.15
Hcn1O88704 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.14□□□□□ -0.15
Hcn1O88704 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.14□□□□□ -0.15
Hcn1O88704 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Hcn1O88704 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hcn1O88704 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hcn1O88704 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hcn1O88704 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hcn1O88704 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms