Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.68□□□□□ -0.38
Cldn1O88551 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Cldn1O88551 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cldn1O88551 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.67□□□□□ -0.38
Cldn1O88551 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldn1O88551 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.67□□□□□ -0.38
Cldn1O88551 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.67□□□□□ -0.38
Cldn1O88551 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cldn1O88551 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.67□□□□□ -0.38
Cldn1O88551 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn1O88551 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cldn1O88551 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cldn1O88551 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.66□□□□□ -0.38
Cldn1O88551 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.66□□□□□ -0.38
Cldn1O88551 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cldn1O88551 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Gm38225-201ENSMUST00000194001 393 ntBASIC12.66□□□□□ -0.38
Cldn1O88551 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.66□□□□□ -0.38
Cldn1O88551 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.66□□□□□ -0.38
Cldn1O88551 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cldn1O88551 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.66□□□□□ -0.38
Cldn1O88551 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cldn1O88551 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn1O88551 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.65□□□□□ -0.38
Cldn1O88551 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cldn1O88551 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Cldn1O88551 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.65□□□□□ -0.38
Cldn1O88551 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cldn1O88551 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.65□□□□□ -0.38
Cldn1O88551 Gm14719-201ENSMUST00000121891 340 ntBASIC12.65□□□□□ -0.38
Cldn1O88551 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Gm29541-201ENSMUST00000191351 678 ntBASIC12.65□□□□□ -0.38
Cldn1O88551 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.65□□□□□ -0.38
Cldn1O88551 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.65□□□□□ -0.38
Cldn1O88551 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn1O88551 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cldn1O88551 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cldn1O88551 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Cldn1O88551 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms