Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.37■□□□□ 0.05
Ttc3O88196 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.37■□□□□ 0.05
Ttc3O88196 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Ttc3O88196 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.37■□□□□ 0.05
Ttc3O88196 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Ttc3O88196 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ttc3O88196 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.37■□□□□ 0.05
Ttc3O88196 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Ttc3O88196 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Ttc3O88196 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ttc3O88196 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.37■□□□□ 0.05
Ttc3O88196 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ttc3O88196 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Gm21854-201ENSMUST00000179901 471 ntBASIC15.36■□□□□ 0.05
Ttc3O88196 Gm27838-201ENSMUST00000184829 128 ntBASIC15.36■□□□□ 0.05
Ttc3O88196 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.36■□□□□ 0.05
Ttc3O88196 Gm9229-201ENSMUST00000222777 126 ntBASIC15.36■□□□□ 0.05
Ttc3O88196 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ttc3O88196 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ttc3O88196 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ttc3O88196 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ttc3O88196 Gm8749-201ENSMUST00000117737 331 ntBASIC15.36■□□□□ 0.05
Ttc3O88196 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.36■□□□□ 0.05
Ttc3O88196 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ttc3O88196 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ttc3O88196 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ttc3O88196 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ttc3O88196 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Gm33320-201ENSMUST00000192232 530 ntBASIC15.35■□□□□ 0.05
Ttc3O88196 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Gm9182-201ENSMUST00000217829 639 ntBASIC15.35■□□□□ 0.05
Ttc3O88196 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.35■□□□□ 0.05
Ttc3O88196 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ttc3O88196 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.35■□□□□ 0.05
Ttc3O88196 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.35■□□□□ 0.05
Ttc3O88196 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.35■□□□□ 0.05
Ttc3O88196 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.35■□□□□ 0.05
Ttc3O88196 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.35■□□□□ 0.05
Ttc3O88196 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.35■□□□□ 0.05
Ttc3O88196 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms