Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pdlim1O70400 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Pdlim1O70400 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pdlim1O70400 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.56□□□□□ -0.08
Pdlim1O70400 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Gm11745-201ENSMUST00000121669 448 ntBASIC14.56□□□□□ -0.08
Pdlim1O70400 Gm14822-201ENSMUST00000122247 291 ntBASIC14.56□□□□□ -0.08
Pdlim1O70400 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Gm5479-201ENSMUST00000160578 435 ntBASIC14.56□□□□□ -0.08
Pdlim1O70400 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.56□□□□□ -0.08
Pdlim1O70400 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.56□□□□□ -0.08
Pdlim1O70400 Gm27920-201ENSMUST00000183953 96 ntBASIC14.56□□□□□ -0.08
Pdlim1O70400 Gm27702-201ENSMUST00000184512 56 ntBASIC14.56□□□□□ -0.08
Pdlim1O70400 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Gm9182-201ENSMUST00000217829 639 ntBASIC14.56□□□□□ -0.08
Pdlim1O70400 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pdlim1O70400 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pdlim1O70400 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pdlim1O70400 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pdlim1O70400 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pdlim1O70400 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pdlim1O70400 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pdlim1O70400 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.56□□□□□ -0.08
Pdlim1O70400 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim1O70400 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.55□□□□□ -0.08
Pdlim1O70400 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.55□□□□□ -0.08
Pdlim1O70400 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Efs-202ENSMUST00000227037 2540 ntBASIC14.55□□□□□ -0.08
Pdlim1O70400 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.55□□□□□ -0.08
Pdlim1O70400 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Pdlim1O70400 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim1O70400 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Pdlim1O70400 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pdlim1O70400 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pdlim1O70400 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pdlim1O70400 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pdlim1O70400 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pdlim1O70400 Gm2810-201ENSMUST00000118681 990 ntBASIC14.54□□□□□ -0.08
Pdlim1O70400 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.54□□□□□ -0.08
Pdlim1O70400 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.54□□□□□ -0.08
Pdlim1O70400 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.54□□□□□ -0.08
Pdlim1O70400 Gm45098-201ENSMUST00000207179 657 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms