Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Chrna4O70174 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Chrna4O70174 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Chrna4O70174 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.89□□□□□ -0.03
Chrna4O70174 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.89□□□□□ -0.03
Chrna4O70174 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Chrna4O70174 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Chrna4O70174 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Gm5264-201ENSMUST00000190584 848 ntBASIC14.88□□□□□ -0.03
Chrna4O70174 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.88□□□□□ -0.03
Chrna4O70174 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.88□□□□□ -0.03
Chrna4O70174 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.88□□□□□ -0.03
Chrna4O70174 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.88□□□□□ -0.03
Chrna4O70174 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Gm10175-201ENSMUST00000086013 645 ntBASIC14.88□□□□□ -0.03
Chrna4O70174 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Chrna4O70174 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.88□□□□□ -0.03
Chrna4O70174 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Chrna4O70174 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Chrna4O70174 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna4O70174 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.87□□□□□ -0.03
Chrna4O70174 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.87□□□□□ -0.03
Chrna4O70174 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.87□□□□□ -0.03
Chrna4O70174 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chrna4O70174 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chrna4O70174 Gm8749-201ENSMUST00000117737 331 ntBASIC14.87□□□□□ -0.03
Chrna4O70174 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.87□□□□□ -0.03
Chrna4O70174 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.87□□□□□ -0.03
Chrna4O70174 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chrna4O70174 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chrna4O70174 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.87□□□□□ -0.03
Chrna4O70174 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.87□□□□□ -0.03
Chrna4O70174 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.87□□□□□ -0.03
Chrna4O70174 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.87□□□□□ -0.03
Chrna4O70174 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Chrna4O70174 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chrna4O70174 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chrna4O70174 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chrna4O70174 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Chrna4O70174 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms