Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.99□□□□□ -0.17
Rdh5O55240 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.98□□□□□ -0.17
Rdh5O55240 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rdh5O55240 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.98□□□□□ -0.17
Rdh5O55240 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.98□□□□□ -0.17
Rdh5O55240 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rdh5O55240 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.98□□□□□ -0.17
Rdh5O55240 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rdh5O55240 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.98□□□□□ -0.17
Rdh5O55240 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rdh5O55240 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rdh5O55240 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.97□□□□□ -0.17
Rdh5O55240 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.97□□□□□ -0.17
Rdh5O55240 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.97□□□□□ -0.17
Rdh5O55240 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.97□□□□□ -0.17
Rdh5O55240 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rdh5O55240 Gm2272-201ENSMUST00000194903 582 ntBASIC13.97□□□□□ -0.17
Rdh5O55240 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.97□□□□□ -0.17
Rdh5O55240 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rdh5O55240 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rdh5O55240 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rdh5O55240 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.97□□□□□ -0.17
Rdh5O55240 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rdh5O55240 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rdh5O55240 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rdh5O55240 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rdh5O55240 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rdh5O55240 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Gm24513-201ENSMUST00000174964 138 ntBASIC13.96□□□□□ -0.17
Rdh5O55240 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Rdh5O55240 Gm5177-201ENSMUST00000183092 997 ntBASIC13.96□□□□□ -0.17
Rdh5O55240 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Mir8117-201ENSMUST00000184773 107 ntBASIC13.96□□□□□ -0.17
Rdh5O55240 Gm27397-201ENSMUST00000184997 107 ntBASIC13.96□□□□□ -0.17
Rdh5O55240 Thap2-203ENSMUST00000218989 527 ntBASIC13.96□□□□□ -0.17
Rdh5O55240 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Rdh5O55240 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.96□□□□□ -0.17
Rdh5O55240 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rdh5O55240 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms