Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.45□□□□□ -0.1
Cbx4O55187 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.45□□□□□ -0.1
Cbx4O55187 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cbx4O55187 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cbx4O55187 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.45□□□□□ -0.1
Cbx4O55187 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cbx4O55187 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cbx4O55187 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cbx4O55187 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cbx4O55187 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cbx4O55187 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cbx4O55187 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cbx4O55187 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.44□□□□□ -0.1
Cbx4O55187 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.44□□□□□ -0.1
Cbx4O55187 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cbx4O55187 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.44□□□□□ -0.1
Cbx4O55187 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.44□□□□□ -0.1
Cbx4O55187 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.44□□□□□ -0.1
Cbx4O55187 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.44□□□□□ -0.1
Cbx4O55187 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.44□□□□□ -0.1
Cbx4O55187 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.44□□□□□ -0.1
Cbx4O55187 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.44□□□□□ -0.1
Cbx4O55187 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cbx4O55187 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.44□□□□□ -0.1
Cbx4O55187 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.44□□□□□ -0.1
Cbx4O55187 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.44□□□□□ -0.1
Cbx4O55187 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.44□□□□□ -0.1
Cbx4O55187 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.44□□□□□ -0.1
Cbx4O55187 Gm10154-201ENSMUST00000084445 354 ntBASIC14.44□□□□□ -0.1
Cbx4O55187 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cbx4O55187 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cbx4O55187 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.44□□□□□ -0.1
Cbx4O55187 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Cbx4O55187 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cbx4O55187 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cbx4O55187 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cbx4O55187 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cbx4O55187 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cbx4O55187 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.43□□□□□ -0.1
Cbx4O55187 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.43□□□□□ -0.1
Cbx4O55187 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cbx4O55187 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cbx4O55187 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.43□□□□□ -0.1
Cbx4O55187 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.43□□□□□ -0.1
Cbx4O55187 Thap2-203ENSMUST00000218989 527 ntBASIC14.43□□□□□ -0.1
Cbx4O55187 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.43□□□□□ -0.1
Cbx4O55187 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.43□□□□□ -0.1
Cbx4O55187 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.43□□□□□ -0.1
Cbx4O55187 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cbx4O55187 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx4O55187 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cbx4O55187 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.42□□□□□ -0.1
Cbx4O55187 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Gm16198-201ENSMUST00000118766 670 ntBASIC14.42□□□□□ -0.1
Cbx4O55187 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Gm5177-201ENSMUST00000183092 997 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms