Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm12527-201ENSMUST00000117967 564 ntBASIC11.65□□□□□ -0.54
Pde6dO55057 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.65□□□□□ -0.54
Pde6dO55057 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.65□□□□□ -0.54
Pde6dO55057 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pde6dO55057 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.65□□□□□ -0.54
Pde6dO55057 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pde6dO55057 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pde6dO55057 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Pde6dO55057 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.65□□□□□ -0.54
Pde6dO55057 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pde6dO55057 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pde6dO55057 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pde6dO55057 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pde6dO55057 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pde6dO55057 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pde6dO55057 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pde6dO55057 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pde6dO55057 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pde6dO55057 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pde6dO55057 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.65□□□□□ -0.55
Pde6dO55057 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pde6dO55057 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Pde6dO55057 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Gm37722-201ENSMUST00000193757 208 ntBASIC11.64□□□□□ -0.55
Pde6dO55057 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.64□□□□□ -0.55
Pde6dO55057 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.64□□□□□ -0.55
Pde6dO55057 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.64□□□□□ -0.55
Pde6dO55057 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pde6dO55057 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pde6dO55057 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.64□□□□□ -0.55
Pde6dO55057 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pde6dO55057 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Pde6dO55057 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Pde6dO55057 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.63□□□□□ -0.55
Pde6dO55057 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Pde6dO55057 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Pde6dO55057 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.63□□□□□ -0.55
Pde6dO55057 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.63□□□□□ -0.55
Pde6dO55057 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Pde6dO55057 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.63□□□□□ -0.55
Pde6dO55057 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.63□□□□□ -0.55
Pde6dO55057 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pde6dO55057 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pde6dO55057 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pde6dO55057 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pde6dO55057 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pde6dO55057 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pde6dO55057 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms