Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm8749-201ENSMUST00000117737 331 ntBASIC16.22■□□□□ 0.19
Prom1O54990 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.22■□□□□ 0.19
Prom1O54990 Gm14042-201ENSMUST00000120139 833 ntBASIC16.22■□□□□ 0.19
Prom1O54990 Gm12138-201ENSMUST00000122180 951 ntBASIC16.22■□□□□ 0.19
Prom1O54990 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.22■□□□□ 0.19
Prom1O54990 Gm23984-201ENSMUST00000157139 203 ntBASIC16.22■□□□□ 0.19
Prom1O54990 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Gm9522-201ENSMUST00000182394 926 ntBASIC16.22■□□□□ 0.19
Prom1O54990 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.22■□□□□ 0.19
Prom1O54990 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.22■□□□□ 0.19
Prom1O54990 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.22■□□□□ 0.19
Prom1O54990 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.22■□□□□ 0.19
Prom1O54990 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Prom1O54990 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Prom1O54990 Asic1-205ENSMUST00000228185 1818 ntBASIC16.22■□□□□ 0.19
Prom1O54990 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.21■□□□□ 0.19
Prom1O54990 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Prom1O54990 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Prom1O54990 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.21■□□□□ 0.19
Prom1O54990 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.21■□□□□ 0.19
Prom1O54990 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.21■□□□□ 0.19
Prom1O54990 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Olfr286-202ENSMUST00000205305 969 ntBASIC16.21■□□□□ 0.19
Prom1O54990 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.21■□□□□ 0.19
Prom1O54990 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.21■□□□□ 0.19
Prom1O54990 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.21■□□□□ 0.19
Prom1O54990 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prom1O54990 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Prom1O54990 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prom1O54990 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.21■□□□□ 0.18
Prom1O54990 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prom1O54990 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prom1O54990 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.21■□□□□ 0.18
Prom1O54990 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Prom1O54990 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Prom1O54990 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prom1O54990 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.2■□□□□ 0.18
Prom1O54990 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prom1O54990 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prom1O54990 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prom1O54990 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prom1O54990 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.2■□□□□ 0.18
Prom1O54990 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.2■□□□□ 0.18
Prom1O54990 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.2■□□□□ 0.18
Prom1O54990 Gm45453-201ENSMUST00000211758 853 ntBASIC16.2■□□□□ 0.18
Prom1O54990 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.2■□□□□ 0.18
Prom1O54990 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prom1O54990 Gm20445-201ENSMUST00000061905 565 ntBASIC16.2■□□□□ 0.18
Prom1O54990 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Prom1O54990 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prom1O54990 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.2■□□□□ 0.18
Prom1O54990 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Prom1O54990 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prom1O54990 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms