Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cldn5O54942 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.31■□□□□ 0.04
Cldn5O54942 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cldn5O54942 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cldn5O54942 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Gm9726-201ENSMUST00000180321 678 ntBASIC15.31■□□□□ 0.04
Cldn5O54942 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.31■□□□□ 0.04
Cldn5O54942 Gm29541-201ENSMUST00000191351 678 ntBASIC15.31■□□□□ 0.04
Cldn5O54942 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.31■□□□□ 0.04
Cldn5O54942 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.31■□□□□ 0.04
Cldn5O54942 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.31■□□□□ 0.04
Cldn5O54942 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cldn5O54942 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cldn5O54942 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn5O54942 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.3■□□□□ 0.04
Cldn5O54942 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cldn5O54942 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Cldn5O54942 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cldn5O54942 Gm9824-201ENSMUST00000178707 561 ntBASIC15.3■□□□□ 0.04
Cldn5O54942 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.3■□□□□ 0.04
Cldn5O54942 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Cldn5O54942 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Cldn5O54942 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.3■□□□□ 0.04
Cldn5O54942 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.3■□□□□ 0.04
Cldn5O54942 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.3■□□□□ 0.04
Cldn5O54942 Efs-202ENSMUST00000227037 2540 ntBASIC15.3■□□□□ 0.04
Cldn5O54942 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cldn5O54942 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cldn5O54942 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cldn5O54942 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn5O54942 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.29■□□□□ 0.04
Cldn5O54942 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cldn5O54942 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.29■□□□□ 0.04
Cldn5O54942 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.29■□□□□ 0.04
Cldn5O54942 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Gm6415-201ENSMUST00000118488 348 ntBASIC15.29■□□□□ 0.04
Cldn5O54942 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cldn5O54942 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.29■□□□□ 0.04
Cldn5O54942 Gm45098-201ENSMUST00000207179 657 ntBASIC15.29■□□□□ 0.04
Cldn5O54942 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.29■□□□□ 0.04
Cldn5O54942 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cldn5O54942 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.29■□□□□ 0.04
Cldn5O54942 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn5O54942 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.29■□□□□ 0.04
Cldn5O54942 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cldn5O54942 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn5O54942 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn5O54942 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn5O54942 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.28■□□□□ 0.04
Cldn5O54942 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.28■□□□□ 0.04
Cldn5O54942 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn5O54942 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms