Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf12O54907 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tnfsf12O54907 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf12O54907 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf12O54907 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf12O54907 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf12O54907 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf12O54907 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tnfsf12O54907 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf12O54907 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tnfsf12O54907 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf12O54907 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.13□□□□□ -0.47
Tnfsf12O54907 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Mir5126-201ENSMUST00000175513 77 ntBASIC12.13□□□□□ -0.47
Tnfsf12O54907 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.13□□□□□ -0.47
Tnfsf12O54907 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.13□□□□□ -0.47
Tnfsf12O54907 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tnfsf12O54907 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Carlr-201ENSMUST00000181515 2574 ntBASIC12.12□□□□□ -0.47
Tnfsf12O54907 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.12□□□□□ -0.47
Tnfsf12O54907 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.12□□□□□ -0.47
Tnfsf12O54907 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf12O54907 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms