Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
DffbO54788 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.71□□□□□ -0.38
DffbO54788 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
DffbO54788 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DffbO54788 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.7□□□□□ -0.38
DffbO54788 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.7□□□□□ -0.38
DffbO54788 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.7□□□□□ -0.38
DffbO54788 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.7□□□□□ -0.38
DffbO54788 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.7□□□□□ -0.38
DffbO54788 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.7□□□□□ -0.38
DffbO54788 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.7□□□□□ -0.38
DffbO54788 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
DffbO54788 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DffbO54788 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
DffbO54788 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
DffbO54788 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
DffbO54788 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.69□□□□□ -0.38
DffbO54788 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Gm11780-201ENSMUST00000136880 516 ntBASIC12.69□□□□□ -0.38
DffbO54788 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.69□□□□□ -0.38
DffbO54788 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
DffbO54788 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
DffbO54788 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
DffbO54788 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.69□□□□□ -0.38
DffbO54788 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.69□□□□□ -0.38
DffbO54788 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DffbO54788 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
DffbO54788 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.69□□□□□ -0.38
DffbO54788 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
DffbO54788 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
DffbO54788 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
DffbO54788 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.68□□□□□ -0.38
DffbO54788 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
DffbO54788 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.68□□□□□ -0.38
DffbO54788 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.68□□□□□ -0.38
DffbO54788 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
DffbO54788 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms