Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.86■□□□□ 0.13
Nr1i3O35627 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1i3O35627 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Nr1i3O35627 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.85■□□□□ 0.13
Nr1i3O35627 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.85■□□□□ 0.13
Nr1i3O35627 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Nr1i3O35627 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.85■□□□□ 0.13
Nr1i3O35627 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.85■□□□□ 0.13
Nr1i3O35627 Gm28659-201ENSMUST00000188013 759 ntBASIC15.85■□□□□ 0.13
Nr1i3O35627 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.85■□□□□ 0.13
Nr1i3O35627 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.85■□□□□ 0.13
Nr1i3O35627 Gm5864-201ENSMUST00000202263 970 ntBASIC15.85■□□□□ 0.13
Nr1i3O35627 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.85■□□□□ 0.13
Nr1i3O35627 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Nr1i3O35627 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Nr1i3O35627 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1i3O35627 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Nr1i3O35627 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.84■□□□□ 0.13
Nr1i3O35627 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
Nr1i3O35627 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Gm13884-201ENSMUST00000118103 829 ntBASIC15.84■□□□□ 0.13
Nr1i3O35627 Gm27628-201ENSMUST00000184911 107 ntBASIC15.84■□□□□ 0.13
Nr1i3O35627 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Olfr286-202ENSMUST00000205305 969 ntBASIC15.84■□□□□ 0.13
Nr1i3O35627 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.84■□□□□ 0.13
Nr1i3O35627 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nr1i3O35627 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.84■□□□□ 0.13
Nr1i3O35627 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.84■□□□□ 0.13
Nr1i3O35627 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.84■□□□□ 0.13
Nr1i3O35627 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms