Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.07□□□□□ -0.16
Clk3O35492 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Clk3O35492 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clk3O35492 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Clk3O35492 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Gm11764-201ENSMUST00000120221 623 ntBASIC14.07□□□□□ -0.16
Clk3O35492 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.07□□□□□ -0.16
Clk3O35492 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Clk3O35492 Gm18489-201ENSMUST00000172565 551 ntBASIC14.07□□□□□ -0.16
Clk3O35492 Gm18733-201ENSMUST00000173950 856 ntBASIC14.07□□□□□ -0.16
Clk3O35492 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Clk3O35492 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.07□□□□□ -0.16
Clk3O35492 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.07□□□□□ -0.16
Clk3O35492 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.07□□□□□ -0.16
Clk3O35492 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clk3O35492 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Clk3O35492 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clk3O35492 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Clk3O35492 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk3O35492 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.06□□□□□ -0.16
Clk3O35492 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Clk3O35492 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.06□□□□□ -0.16
Clk3O35492 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.06□□□□□ -0.16
Clk3O35492 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.06□□□□□ -0.16
Clk3O35492 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.06□□□□□ -0.16
Clk3O35492 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.06□□□□□ -0.16
Clk3O35492 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Clk3O35492 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clk3O35492 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.05□□□□□ -0.16
Clk3O35492 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.05□□□□□ -0.16
Clk3O35492 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clk3O35492 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Clk3O35492 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.05□□□□□ -0.16
Clk3O35492 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Clk3O35492 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clk3O35492 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clk3O35492 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms