Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Clcn6O35454 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn6O35454 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn6O35454 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn6O35454 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn6O35454 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clcn6O35454 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn6O35454 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn6O35454 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clcn6O35454 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Clcn6O35454 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.14■□□□□ 0.17
Clcn6O35454 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.14■□□□□ 0.17
Clcn6O35454 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn6O35454 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn6O35454 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Clcn6O35454 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Gm2288-201ENSMUST00000118560 638 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm2318-201ENSMUST00000119623 639 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Mup-ps10-201ENSMUST00000119626 556 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm13339-201ENSMUST00000120651 510 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm7438-201ENSMUST00000177664 639 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC16.13■□□□□ 0.17
Clcn6O35454 Gm7408-201ENSMUST00000178014 639 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm7386-201ENSMUST00000178020 639 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm3657-201ENSMUST00000178170 639 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm7415-201ENSMUST00000178205 639 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm7398-201ENSMUST00000178589 639 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm7391-201ENSMUST00000178680 639 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Clcn6O35454 Gm7375-201ENSMUST00000179232 639 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm3681-201ENSMUST00000179940 639 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm8641-201ENSMUST00000186995 826 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC16.13■□□□□ 0.17
Clcn6O35454 Gm42698-201ENSMUST00000197790 762 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Gm44430-201ENSMUST00000203376 995 ntBASIC16.13■□□□□ 0.17
Clcn6O35454 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clcn6O35454 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.13■□□□□ 0.17
Clcn6O35454 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn6O35454 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Clcn6O35454 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Clcn6O35454 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Clcn6O35454 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.12■□□□□ 0.17
Clcn6O35454 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Gm7289-201ENSMUST00000168993 734 ntBASIC16.12■□□□□ 0.17
Clcn6O35454 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Clcn6O35454 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Clcn6O35454 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC16.12■□□□□ 0.17
Clcn6O35454 Gm37700-201ENSMUST00000192617 965 ntBASIC16.12■□□□□ 0.17
Clcn6O35454 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.12■□□□□ 0.17
Clcn6O35454 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 RMST_1.1-211ENSMUST00000219726 783 ntTSL 3 BASIC16.12■□□□□ 0.17
Clcn6O35454 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC16.12■□□□□ 0.17
Clcn6O35454 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.12■□□□□ 0.17
Clcn6O35454 AC154562.1-201ENSMUST00000226140 966 ntBASIC16.12■□□□□ 0.17
Clcn6O35454 AC123735.1-201ENSMUST00000227358 605 ntBASIC16.12■□□□□ 0.17
Clcn6O35454 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Clcn6O35454 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Clcn6O35454 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Clcn6O35454 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Clcn6O35454 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Clcn6O35454 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn6O35454 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms