Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.53□□□□□ -0.56
Tnfsf11O35235 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.53□□□□□ -0.56
Tnfsf11O35235 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.53□□□□□ -0.56
Tnfsf11O35235 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfsf11O35235 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfsf11O35235 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Tnfsf11O35235 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfsf11O35235 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Gm13312-201ENSMUST00000119631 718 ntBASIC11.52□□□□□ -0.57
Tnfsf11O35235 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.52□□□□□ -0.57
Tnfsf11O35235 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Gm5587-201ENSMUST00000206270 674 ntBASIC11.52□□□□□ -0.57
Tnfsf11O35235 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfsf11O35235 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Gm8344-201ENSMUST00000119813 856 ntBASIC11.51□□□□□ -0.57
Tnfsf11O35235 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms