Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col15a1O35206 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.75■□□□□ 0.59
Col15a1O35206 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col15a1O35206 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col15a1O35206 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col15a1O35206 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col15a1O35206 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col15a1O35206 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col15a1O35206 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col15a1O35206 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Col15a1O35206 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Col15a1O35206 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.74■□□□□ 0.59
Col15a1O35206 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Col15a1O35206 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Gm27701-201ENSMUST00000184498 110 ntBASIC18.74■□□□□ 0.59
Col15a1O35206 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Col15a1O35206 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Col15a1O35206 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col15a1O35206 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.74■□□□□ 0.59
Col15a1O35206 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.73■□□□□ 0.59
Col15a1O35206 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Col15a1O35206 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.73■□□□□ 0.59
Col15a1O35206 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.73■□□□□ 0.59
Col15a1O35206 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Col15a1O35206 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.73■□□□□ 0.59
Col15a1O35206 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.73■□□□□ 0.59
Col15a1O35206 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.73■□□□□ 0.59
Col15a1O35206 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.73■□□□□ 0.59
Col15a1O35206 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.73■□□□□ 0.59
Col15a1O35206 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.73■□□□□ 0.59
Col15a1O35206 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Col15a1O35206 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.73■□□□□ 0.59
Col15a1O35206 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col15a1O35206 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.72■□□□□ 0.59
Col15a1O35206 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col15a1O35206 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col15a1O35206 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col15a1O35206 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col15a1O35206 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col15a1O35206 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col15a1O35206 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.72■□□□□ 0.59
Col15a1O35206 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col15a1O35206 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col15a1O35206 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Col15a1O35206 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col15a1O35206 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col15a1O35206 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.72■□□□□ 0.59
Col15a1O35206 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col15a1O35206 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col15a1O35206 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col15a1O35206 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.71■□□□□ 0.59
Col15a1O35206 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.71■□□□□ 0.59
Col15a1O35206 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.71■□□□□ 0.59
Col15a1O35206 Gm9002-201ENSMUST00000178437 499 ntBASIC18.71■□□□□ 0.59
Col15a1O35206 Mir7654-201ENSMUST00000185082 70 ntBASIC18.71■□□□□ 0.59
Col15a1O35206 Gm28911-201ENSMUST00000188837 117 ntBASIC18.71■□□□□ 0.59
Col15a1O35206 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.71■□□□□ 0.59
Col15a1O35206 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col15a1O35206 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col15a1O35206 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col15a1O35206 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Col15a1O35206 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col15a1O35206 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col15a1O35206 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Col15a1O35206 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col15a1O35206 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col15a1O35206 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.71■□□□□ 0.59
Col15a1O35206 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Col15a1O35206 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms