Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
B020004C17RikJ3QP07 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Gm5035-201ENSMUST00000215581 927 ntBASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
B020004C17RikJ3QP07 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Gm28911-201ENSMUST00000188837 117 ntBASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Gm9899-201ENSMUST00000065519 555 ntBASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
B020004C17RikJ3QP07 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Gm12341-201ENSMUST00000119724 503 ntBASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
B020004C17RikJ3QP07 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms