Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Shisa8J3QNX5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Gm15358-201ENSMUST00000119249 520 ntBASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Gm25016-201ENSMUST00000158399 131 ntBASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Gm23634-201ENSMUST00000175071 91 ntBASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Gm27742-201ENSMUST00000184667 60 ntBASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.49□□□□□ -0.25
Shisa8J3QNX5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shisa8J3QNX5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms