Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Gm12895-201ENSMUST00000122214 226 ntBASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Gm11780-201ENSMUST00000136880 516 ntBASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh1F7BJK1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh1F7BJK1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh1F7BJK1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pcdh1F7BJK1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh1F7BJK1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh1F7BJK1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh1F7BJK1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh1F7BJK1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms