Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm19078-201ENSMUST00000206311 727 ntBASIC20.41■□□□□ 0.86
Hfm1D3Z4R1 Gm38037-201ENSMUST00000192600 1624 ntBASIC20.41■□□□□ 0.86
Hfm1D3Z4R1 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.41■□□□□ 0.86
Hfm1D3Z4R1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hfm1D3Z4R1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hfm1D3Z4R1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Trav4d-2-201ENSMUST00000120914 335 ntBASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Gm15429-201ENSMUST00000151268 798 ntBASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hfm1D3Z4R1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Hfm1D3Z4R1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hfm1D3Z4R1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hfm1D3Z4R1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Hfm1D3Z4R1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hfm1D3Z4R1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hfm1D3Z4R1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hfm1D3Z4R1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Gm23931-201ENSMUST00000103842 109 ntBASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Gm24196-201ENSMUST00000179161 110 ntBASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Gm27731-201ENSMUST00000185192 107 ntBASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Gm6091-201ENSMUST00000098307 165 ntBASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hfm1D3Z4R1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Gm18905-201ENSMUST00000205454 928 ntBASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 AC122459.1-201ENSMUST00000228373 885 ntBASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Zscan30-202ENSMUST00000224144 1458 ntBASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Gm27528-202ENSMUST00000222916 2012 ntBASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC20.37■□□□□ 0.85
Hfm1D3Z4R1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Gm11524-201ENSMUST00000119349 807 ntBASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Gm15376-201ENSMUST00000122258 783 ntBASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hfm1D3Z4R1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms