Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tmf1B9EKI3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tmf1B9EKI3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Gm13616-201ENSMUST00000120600 222 ntBASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Gm25948-201ENSMUST00000175334 112 ntBASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tmf1B9EKI3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 AA543401-201ENSMUST00000164248 1269 ntBASIC19.94■□□□□ 0.78
Tmf1B9EKI3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Gm18049-201ENSMUST00000208909 581 ntBASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tmf1B9EKI3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Gm5779-201ENSMUST00000218467 910 ntBASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tmf1B9EKI3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Gm29541-201ENSMUST00000191351 678 ntBASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Carlr-201ENSMUST00000181515 2574 ntBASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Gm29340-201ENSMUST00000188763 3854 ntBASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Tmf1B9EKI3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tmf1B9EKI3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms