Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clip3B9EHT4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.32□□□□□ -0.12
Clip3B9EHT4 Gm45747-201ENSMUST00000212203 999 ntBASIC14.32□□□□□ -0.12
Clip3B9EHT4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.32□□□□□ -0.12
Clip3B9EHT4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Clip3B9EHT4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.32□□□□□ -0.12
Clip3B9EHT4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip3B9EHT4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Gm12008-201ENSMUST00000117791 755 ntBASIC14.31□□□□□ -0.12
Clip3B9EHT4 Gm26308-201ENSMUST00000157768 69 ntBASIC14.31□□□□□ -0.12
Clip3B9EHT4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Gm27301-201ENSMUST00000184012 127 ntBASIC14.31□□□□□ -0.12
Clip3B9EHT4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Thap2-203ENSMUST00000218989 527 ntBASIC14.31□□□□□ -0.12
Clip3B9EHT4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip3B9EHT4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.3□□□□□ -0.12
Clip3B9EHT4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms