Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Gm12887B1AVM1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm12887B1AVM1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm12887B1AVM1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Gm12887B1AVM1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm12887B1AVM1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm12887B1AVM1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm12887B1AVM1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm12887B1AVM1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm12887B1AVM1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm12887B1AVM1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Gm22240-201ENSMUST00000175225 82 ntBASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Gm18622-201ENSMUST00000219361 595 ntBASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm12887B1AVM1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Gm43799-201ENSMUST00000201845 579 ntBASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm12887B1AVM1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm12887B1AVM1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms