Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Olfr286-202ENSMUST00000205305 969 ntBASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Gm21769-201ENSMUST00000211922 111 ntBASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Gm8959-201ENSMUST00000213150 571 ntBASIC22.8■■□□□ 1.24
Shroom2A2ALU4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Gm21038-201ENSMUST00000222205 1383 ntBASIC22.8■■□□□ 1.24
Shroom2A2ALU4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Mxra8os-201ENSMUST00000097740 687 ntBASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Gm45186-201ENSMUST00000206874 478 ntBASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Gm10313-201ENSMUST00000095320 1002 ntBASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom2A2ALU4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Snord83b-201ENSMUST00000104546 94 ntBASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Gm12566-201ENSMUST00000121479 359 ntBASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Gm9124-201ENSMUST00000191789 1092 ntBASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Gm9113-201ENSMUST00000192510 1018 ntBASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Gm9131-201ENSMUST00000193557 1089 ntBASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Gm9121-201ENSMUST00000193749 1071 ntBASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom2A2ALU4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 AC154680.1-201ENSMUST00000224376 859 ntBASIC22.77■■□□□ 1.24
Shroom2A2ALU4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Shroom2A2ALU4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Gm37812-201ENSMUST00000195216 2475 ntBASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Shroom2A2ALU4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms