Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Gm25990-201ENSMUST00000102440 86 ntBASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Gm11764-201ENSMUST00000120221 623 ntBASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav12-1A0N8R1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav12-1A0N8R1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.33□□□□□ -0.43
Trav12-1A0N8R1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Gm7222-201ENSMUST00000117512 906 ntBASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.33□□□□□ -0.44
Trav12-1A0N8R1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12-1A0N8R1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms